Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CB27Uncharacterized protein. (858 aa)    
Predicted Functional Partners:
A0A484CKH0
PH domain-containing protein.
    
   0.664
A0A484D325
PH domain-containing protein.
    
   0.664
A0A484D6M3
Uncharacterized protein.
    
  0.629
A0A484DG52
Uncharacterized protein.
    
  0.629
A0A484CJK6
Uncharacterized protein.
    
  0.555
A0A484D8I1
Uncharacterized protein.
    
  0.555
A0A484CBI4
Uncharacterized protein.
 
      0.485
A0A484CUI2
Uncharacterized protein.
     
 0.437
A0A484CTE6
Uncharacterized protein.
    
  0.434
A0A484CXS2
Uncharacterized protein.
    
  0.434
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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