Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CB36Helicase ATP-binding domain-containing protein. (375 aa)    
Predicted Functional Partners:
A0A484CGA3
RING-type domain-containing protein.
    
 0.998
A0A484DB35
Uncharacterized protein.
    
 0.998
A0A484DDW3
Uncharacterized protein.
   
 0.997
A0A484C5E1
Helicase C-terminal domain-containing protein.
 
 
 0.996
A0A484D668
FA_FANCE domain-containing protein.
    
 0.996
A0A484C6F1
ERCC4 domain-containing protein.
    
 0.994
A0A484D3U5
Uncharacterized protein.
   
 0.993
A0A484CVL5
Uncharacterized protein.
   
 0.990
A0A484D1C0
Fanconi_A_N domain-containing protein.
    
 0.989
A0A484C7Z8
Uncharacterized protein.
   
 0.988
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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