Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CB42Uncharacterized protein. (2738 aa)    
Predicted Functional Partners:
A0A484CND2
Uncharacterized protein.
   
 0.798
A0A484DKW8
Uncharacterized protein.
   
 0.798
A0A484C9E5
Integrin beta.
   
 0.785
A0A484CKX8
Uncharacterized protein.
   
 0.750
A0A484CH65
Uncharacterized protein.
 
     0.733
A0A484D5H7
Uncharacterized protein.
   
 0.714
A0A484DE45
Uncharacterized protein.
   
 0.714
A0A484CTN3
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.682
A0A484CUJ2
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.682
A0A484CL65
Uncharacterized protein.
   
 0.670
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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