STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CB49DNA_mis_repair domain-containing protein. (726 aa)    
Predicted Functional Partners:
A0A484C3D0
Uncharacterized protein.
    
0.999
A0A484C271
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.998
A0A484CCD8
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.997
A0A484CAP4
Uncharacterized protein.
   
 0.996
A0A484CW77
HMG box domain-containing protein.
    
0.996
A0A484C5D5
WW domain-containing protein.
    
0.995
A0A484D467
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
   
 0.986
A0A484DCU1
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.986
A0A484DID8
Helicase ATP-binding domain-containing protein.
   
 0.986
A0A484D328
Uncharacterized protein.
  
 0.985
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.