STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CB61Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (351 aa)    
Predicted Functional Partners:
A0A484D6C7
SMC_N domain-containing protein.
   
 0.999
A0A484D960
MAGE domain-containing protein.
   
 0.999
A0A484DAB8
SP-RING-type domain-containing protein.
    
 0.999
A0A484DND3
zf-RING-like domain-containing protein.
   
 0.999
A0A484C9Q7
SMC_N domain-containing protein.
   
 0.979
A0A484CDT9
AAA_23 domain-containing protein.
   
 0.979
A0A484DKG3
SMC_N domain-containing protein.
   
 0.928
A0A484DL93
SMC hinge domain-containing protein.
   
 0.928
A0A484DI31
Structural maintenance of chromosomes protein.
   
 0.925
A0A484D445
SMC hinge domain-containing protein.
   
 0.919
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.