Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CB81Uncharacterized protein. (392 aa)    
Predicted Functional Partners:
A0A484CBG0
Uncharacterized protein.
 
     0.804
A0A484D0C4
Uncharacterized protein.
      
 0.516
A0A484C7I9
Uncharacterized protein.
   
  
 0.511
A0A484DPN8
Uncharacterized protein.
      
 0.485
A0A484BZJ7
Uncharacterized protein.
     
  0.478
A0A484CE54
L-type lectin-like domain-containing protein.
     
  0.478
A0A484CLP6
Uncharacterized protein.
   
 
 0.469
A0A484CQW9
MSP domain-containing protein.
     
  0.458
A0A484CXK7
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
     
  0.458
A0A484D5P2
Uncharacterized protein.
     
  0.458
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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