STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CB98WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (507 aa)    
Predicted Functional Partners:
A0A484CUP3
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.929
A0A484CQL1
Tyrosine--tRNA ligase.
  
 
 0.920
A0A484D6J1
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.889
A0A484C960
Ribosomal_S10 domain-containing protein.
  
 
 0.856
A0A484DHZ3
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.811
A0A484DMF0
Uncharacterized protein.
  
 
0.803
A0A484DET8
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.785
A0A484CMP9
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.752
A0A484DJ41
B5 domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
  
  
 0.749
A0A484C9G9
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.748
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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