Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CB99Uncharacterized protein. (816 aa)    
Predicted Functional Partners:
A0A484DCT8
Uncharacterized protein.
      
 0.628
A0A484CCQ2
Ubiquitin-like domain-containing protein.
    
  0.603
A0A484CUS3
USP domain-containing protein; Belongs to the peptidase C19 family.
    
   0.579
A0A484CMZ2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.575
A0A484CSN7
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.575
A0A484CXE1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.575
A0A484DE37
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.562
A0A484D903
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
      
 0.555
A0A484D1R8
Ubiquitin-like domain-containing protein.
    
  0.539
A0A484DGE7
Uncharacterized protein.
    
  0.513
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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