STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBD0Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
A0A484C0E3
Myotubularin phosphatase domain-containing protein.
 
  
  0.853
A0A484C164
PIPK domain-containing protein.
    
  0.814
A0A484C704
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.814
A0A484CE14
Uncharacterized protein.
 
   
  0.810
A0A484CMM1
Uncharacterized protein.
 
   
  0.810
A0A484DCP9
Uncharacterized protein.
     
  0.810
A0A484C6A2
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.722
A0A484C450
COMM domain-containing protein.
   
  0.716
A0A484DJ50
RING-type domain-containing protein.
    
 0.704
A0A484CCZ7
Ubiquitin-like domain-containing protein.
    
  0.702
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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