A0A484CBD4 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484CBD4

MFS domain-containing protein. (230 aa)

Predicted Functional Partners:

A0A484CY07

0.888

A0A484DAP3

0.824

A0A484DGT3

0.641

A0A484CIR3

0.587

A0A484DKW4

0.569

A0A484CCM0

0.567

A0A484CP20

0.567

A0A484D8M8

0.567

A0A484DAM5

0.567

A0A484DQX3

0.567

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484CBD4	A0A484CCM0	MFS domain-containing protein.	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	0.567
A0A484CBD4	A0A484CIR3	MFS domain-containing protein.	AB hydrolase-1 domain-containing protein.	0.587
A0A484CBD4	A0A484CP20	MFS domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.567
A0A484CBD4	A0A484CY07	MFS domain-containing protein.	Uncharacterized protein.	0.888
A0A484CBD4	A0A484D8M8	MFS domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.567
A0A484CBD4	A0A484DAM5	MFS domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.567
A0A484CBD4	A0A484DAP3	MFS domain-containing protein.	Uncharacterized protein.	0.824
A0A484CBD4	A0A484DGT3	MFS domain-containing protein.	MFS domain-containing protein.	0.641
A0A484CBD4	A0A484DKW4	MFS domain-containing protein.	Thymidine kinase.	0.569
A0A484CBD4	A0A484DQX3	MFS domain-containing protein.	Suf domain-containing protein.	0.567
A0A484CCM0	A0A484CBD4	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	MFS domain-containing protein.	0.567
A0A484CCM0	A0A484CP20	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.541
A0A484CCM0	A0A484D8M8	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.541
A0A484CCM0	A0A484DAM5	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.595
A0A484CCM0	A0A484DGT3	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	MFS domain-containing protein.	0.567
A0A484CIR3	A0A484CBD4	AB hydrolase-1 domain-containing protein.	MFS domain-containing protein.	0.587
A0A484CIR3	A0A484CP20	AB hydrolase-1 domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.408
A0A484CIR3	A0A484CY07	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.931
A0A484CIR3	A0A484D8M8	AB hydrolase-1 domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.408
A0A484CIR3	A0A484DAM5	AB hydrolase-1 domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.408