Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBD5Uncharacterized protein. (370 aa)    
Predicted Functional Partners:
A0A484CEP5
Uncharacterized protein.
    
 0.612
A0A484CIT8
Uncharacterized protein.
    
 0.612
A0A484CUI0
Uncharacterized protein.
    
 0.612
A0A484D8Q7
Uncharacterized protein.
    
 0.612
A0A484DA82
Uncharacterized protein.
    
 0.612
A0A484DCI6
Uncharacterized protein.
    
 0.612
A0A484D9S6
Uncharacterized protein.
   
 0.609
A0A484CT95
Uncharacterized protein.
  
  
  0.521
A0A484C0Y0
Integrin beta; Belongs to the integrin beta chain family.
    
 0.485
A0A484C264
Integrin beta; Belongs to the integrin beta chain family.
    
 0.485
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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