Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBD6Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family. (2014 aa)    
Predicted Functional Partners:
A0A484CSY2
Uncharacterized protein.
   
 0.888
A0A484CCC8
ABC transporter domain-containing protein.
  
 0.873
A0A484DJT1
ABC transporter domain-containing protein.
  
 0.873
A0A484DNJ5
ABC transporter domain-containing protein.
  
 0.873
A0A484D4W1
Uncharacterized protein.
      
 0.872
A0A484C4D3
Rib_recp_KP_reg domain-containing protein.
    
   0.826
A0A484C422
Uncharacterized protein.
   
  
 0.682
A0A484CF49
Uncharacterized protein.
    
 
 0.666
A0A484DAC0
Uncharacterized protein.
    
 
 0.666
A0A484CVK6
Uncharacterized protein.
   
 0.664
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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