Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBF1WD_REPEATS_REGION domain-containing protein. (609 aa)    
Predicted Functional Partners:
A0A484CQG7
WD_REPEATS_REGION domain-containing protein.
    
 0.979
A0A484C1E4
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.930
A0A484C6A5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.930
A0A484CYQ9
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.930
A0A484D0M9
Ubiquitin carboxyl-terminal hydrolase.
    
 0.810
A0A484CN61
Uncharacterized protein.
    
 0.807
A0A484CQB0
PPM-type phosphatase domain-containing protein.
   
 
 0.777
A0A484DNS2
PPM-type phosphatase domain-containing protein.
   
 
 0.777
A0A484DNK2
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.768
A0A484DCP3
Uncharacterized protein.
  
  0.763
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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