STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBF9Uncharacterized protein. (921 aa)    
Predicted Functional Partners:
A0A484CXQ0
TPR_REGION domain-containing protein.
   
 
 0.676
A0A484DAX8
Uncharacterized protein.
    
  0.590
A0A484CX30
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
  0.546
A0A484CQL8
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
  0.542
A0A484CM55
Uncharacterized protein.
   
 
 0.522
A0A484CWP2
Uncharacterized protein.
   
 
 0.522
A0A484CCM0
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
   
 
 0.414
A0A484CTW5
ATG11 domain-containing protein.
   
  
 0.406
A0A484DMX3
CPSF_A domain-containing protein.
      
 0.400
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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