Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBG5Spectrin beta chain; Belongs to the spectrin family. (2349 aa)    
Predicted Functional Partners:
A0A484CKX8
Uncharacterized protein.
   
 0.940
A0A484CHF7
Anion exchange protein.
   
 
 0.655
A0A484D935
FERM domain-containing protein.
   
 0.645
A0A484CJ76
Uncharacterized protein.
   
 0.632
A0A484DBK1
Uncharacterized protein.
   
 0.632
A0A484DC32
Uncharacterized protein.
   
 0.632
A0A484CR47
FERM domain-containing protein.
   
 0.590
A0A484C979
Uncharacterized protein; Belongs to the actin family.
    
  0.587
A0A484CEW5
HP domain-containing protein.
   
 
 0.586
A0A484CFW8
Uncharacterized protein.
    
  0.586
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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