Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBH4Uncharacterized protein. (569 aa)    
Predicted Functional Partners:
A0A484CAT2
FYVE-type domain-containing protein.
      
 0.883
A0A484CLF9
3'-5' exonuclease domain-containing protein.
      
 0.867
A0A484DMF0
Uncharacterized protein.
   
 
 0.792
A0A484CQC9
RRM domain-containing protein.
   
 0.791
A0A484CEB9
Uncharacterized protein.
   
 0.786
A0A484DCH9
Uncharacterized protein.
   
 0.786
A0A484C7W7
RRM domain-containing protein.
   
 0.732
A0A484CTJ4
RRM domain-containing protein.
   
 0.732
A0A484DIP1
LisH domain-containing protein.
    
 
 0.681
A0A484CG78
Uncharacterized protein.
   
 0.678
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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