STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBK9Uncharacterized protein. (444 aa)    
Predicted Functional Partners:
A0A484DFT2
Uncharacterized protein.
   
 0.929
A0A484DDL4
Uncharacterized protein.
  
0.921
A0A484CXH6
Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family.
   
0.902
A0A484DK96
BZIP domain-containing protein.
   
 0.871
A0A484CFS7
Uncharacterized protein.
    
 0.862
A0A484DKM0
Uncharacterized protein.
    
 0.862
A0A484C2U6
Uncharacterized protein.
    
  0.861
A0A484CEY8
Uncharacterized protein.
    
  0.861
A0A484CI47
Uncharacterized protein.
  
 
 
0.855
A0A484C8U2
BZIP domain-containing protein.
   
 0.799
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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