Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBL0Uncharacterized protein. (915 aa)    
Predicted Functional Partners:
A0A484CA78
Uncharacterized protein.
   
 0.985
A0A484CC58
Uncharacterized protein.
   
 0.985
A0A484D885
Uncharacterized protein.
   
 0.965
A0A484DB72
Uncharacterized protein.
   
 0.961
A0A484DKL5
Uncharacterized protein.
   
 0.961
A0A484DKN4
Uncharacterized protein.
   
 0.961
A0A484CYQ2
Uncharacterized protein.
   
 0.941
A0A484DLX5
Uncharacterized protein.
   
 0.941
A0A484CH46
Uncharacterized protein.
    
 
0.936
A0A484DKL3
Uncharacterized protein.
    
 
0.936
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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