Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBN2Homeobox domain-containing protein. (254 aa)    
Predicted Functional Partners:
A0A484CNV5
Homeobox domain-containing protein.
   
 
 0.754
A0A484D960
MAGE domain-containing protein.
    
 
 0.748
A0A484C5G0
TGF_BETA_2 domain-containing protein.
    
 0.604
A0A484C8U4
TGF_BETA_2 domain-containing protein.
    
 0.604
A0A484DHI3
TGF_BETA_2 domain-containing protein.
    
 0.604
A0A484C3G0
Uncharacterized protein.
    
   0.587
A0A484DPK4
Uncharacterized protein.
    
   0.587
A0A484D1G5
E2F_TDP domain-containing protein.
   
  
 0.566
A0A484CY15
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.538
A0A484DNL1
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.538
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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