Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBP2Uncharacterized protein. (808 aa)    
Predicted Functional Partners:
A0A484DQ53
Uncharacterized protein.
   
  
 0.790
A0A484C4E3
Uncharacterized protein.
    
 0.751
A0A484CBS5
Uncharacterized protein.
    
 
 0.715
A0A484D1C5
Uncharacterized protein.
      
 0.699
A0A484CGM4
Uncharacterized protein.
    
 0.694
A0A484D587
Uncharacterized protein.
    
 
 0.686
A0A484D7A2
Uncharacterized protein.
    
 
 0.686
A0A484CAS7
Uncharacterized protein.
      
 0.684
A0A484CVU3
Uncharacterized protein.
    
 0.647
A0A484CB96
Uncharacterized protein.
    
 
 0.641
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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