STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBS6Protein kinase domain-containing protein. (569 aa)    
Predicted Functional Partners:
A0A484CA82
Uncharacterized protein.
 
      0.859
A0A484CBB8
Uncharacterized protein.
    
 
 0.736
A0A484DL47
Uncharacterized protein.
    
 
 0.736
A0A484CDZ1
Uncharacterized protein.
    
 0.566
A0A484DC93
Uncharacterized protein.
    
 0.566
A0A484CXG8
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
      
 0.509
A0A484C828
ANK_REP_REGION domain-containing protein.
    
 
 0.501
A0A484DEV3
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.451
A0A484CIC3
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 
 0.441
A0A484C3F2
Uncharacterized protein.
      
 0.428
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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