STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBS8Uncharacterized protein. (727 aa)    
Predicted Functional Partners:
A0A484CHP1
Aamy domain-containing protein.
  
  
 0.624
A0A484CDH9
Uncharacterized protein.
      
 0.570
A0A484CJK4
Uncharacterized protein.
      
 0.522
A0A484C045
Uncharacterized protein.
      
 0.521
A0A484CHA7
Uncharacterized protein.
      
 0.482
A0A484CNC9
Uncharacterized protein.
      
 0.451
A0A484CP38
PH domain-containing protein.
      
 0.448
A0A484CA50
Aa_trans domain-containing protein.
    
 
 0.437
A0A484CSB0
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.405
A0A484C734
Mannosyltransferase.
      
 0.403
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.