STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBT3Uncharacterized protein. (577 aa)    
Predicted Functional Partners:
A0A484CUP5
Uncharacterized protein.
   
  0.574
A0A484CIF9
Uncharacterized protein.
    
 0.572
A0A484DNX4
Uncharacterized protein.
    
 0.572
A0A484C3V1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.569
A0A484DG38
V-SNARE coiled-coil homology domain-containing protein.
    
 0.552
A0A484CZX2
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.548
A0A484DIL4
Uncharacterized protein.
     
 0.534
A0A484DN35
ANK_REP_REGION domain-containing protein.
    
  0.524
A0A484C8X8
Uncharacterized protein.
    
  0.507
A0A484CBG7
Uncharacterized protein.
    
  0.507
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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