STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBT8Homeobox domain-containing protein. (241 aa)    
Predicted Functional Partners:
A0A484CM50
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
    
   0.955
A0A484DAR6
Uncharacterized protein.
    
   0.955
A0A484DEL9
Uncharacterized protein.
    
   0.955
A0A484DLC6
Uncharacterized protein.
    
   0.955
A0A484DM26
LisH domain-containing protein.
    
   0.955
A0A484D9Q2
Uncharacterized protein.
    
 
 0.903
A0A484CMZ9
Uncharacterized protein.
    
   0.875
A0A484CPS0
Uncharacterized protein.
    
   0.875
A0A484CRM2
Uncharacterized protein.
    
   0.875
A0A484D1T7
Nefa_Nip30_N domain-containing protein.
    
   0.875
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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