Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBV1JmjC domain-containing protein. (354 aa)    
Predicted Functional Partners:
A0A484D0K8
Uncharacterized protein.
    
 
 0.963
A0A484DIX5
Uncharacterized protein.
    
 0.954
A0A484DBA4
ANK_REP_REGION domain-containing protein.
    
 
 0.951
A0A484CB60
Uncharacterized protein.
    
 0.942
A0A484CKD6
Uncharacterized protein.
    
 0.942
A0A484CQB9
Uncharacterized protein.
    
 
 0.886
A0A484DG35
Uncharacterized protein.
    
 
 0.886
A0A484C199
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
    
   0.878
A0A484D0X4
NAD(P)-bd_dom domain-containing protein.
    
   0.871
A0A484C472
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
   
   0.848
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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