Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBW7THUMP domain-containing protein. (621 aa)    
Predicted Functional Partners:
A0A484C9K5
Uncharacterized protein.
   
    0.713
A0A484D7F4
Alkyl transferase; Belongs to the UPP synthase family.
   
    0.713
A0A484CRT8
Uncharacterized protein.
      
 0.706
A0A484CSV7
Uncharacterized protein.
      
 0.705
A0A484D7X5
SAP domain-containing protein.
      
 0.692
A0A484D9U2
UPF0020 domain-containing protein.
     
 0.672
A0A484C3T6
Archease domain-containing protein.
      
 0.671
A0A484D678
Uncharacterized protein.
      
 0.667
A0A484C6G2
Str_synth domain-containing protein.
  
    0.658
A0A484CHR2
S1 motif domain-containing protein.
  
    0.658
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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