Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBW8Uncharacterized protein. (882 aa)    
Predicted Functional Partners:
A0A484C416
Uncharacterized protein.
   
 
 0.907
A0A484C6T2
Uncharacterized protein.
   
   0.783
A0A484CV88
Uncharacterized protein.
   
   0.783
A0A484DK70
Uncharacterized protein.
   
 
 0.751
A0A484DJJ7
Alpha-mannosidase.
   
 
 0.695
A0A484C841
Alpha-mannosidase.
   
 
 0.681
A0A484D2P3
Beta-hexosaminidase.
  
 
 0.660
A0A484CEM2
Beta-hexosaminidase.
  
 
 0.655
A0A484D861
Choline dehydrogenase.
    
 0.640
A0A484D2N8
Alpha-mann_mid domain-containing protein.
     
 0.638
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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