A0A484CBW9 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484CBW9

Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (286 aa)

Predicted Functional Partners:

A0A484CND7

0.616

A0A484DJR6

0.616

A0A484CEM6

0.589

A0A484CYW9

0.586

COQ3

0.585

A0A484BXQ3

0.582

A0A484C1D0

0.582

A0A484BYA9

0.575

A0A484DKR4

0.575

A0A484DAP3

0.571

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A484BXQ3	A0A484BYA9	A0A484BXQ3	A0A484BYA9	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.670
A0A484BXQ3	A0A484C1D0	A0A484BXQ3	A0A484C1D0	Uncharacterized protein.	ACB domain-containing protein.	0.920
A0A484BXQ3	A0A484CBW9	A0A484BXQ3	A0A484CBW9	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.582
A0A484BXQ3	A0A484CND7	A0A484BXQ3	A0A484CND7	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.561
A0A484BXQ3	A0A484CYW9	A0A484BXQ3	A0A484CYW9	Uncharacterized protein.	Carrier domain-containing protein.	0.617
A0A484BXQ3	A0A484DAP3	A0A484BXQ3	A0A484DAP3	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A484BXQ3	A0A484DJR6	A0A484BXQ3	A0A484DJR6	Uncharacterized protein.	PALB2_WD40 domain-containing protein.	0.561
A0A484BXQ3	A0A484DKR4	A0A484BXQ3	A0A484DKR4	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.670
A0A484BYA9	A0A484BXQ3	A0A484BYA9	A0A484BXQ3	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.670
A0A484BYA9	A0A484C1D0	A0A484BYA9	A0A484C1D0	2Fe-2S ferredoxin-type domain-containing protein.	ACB domain-containing protein.	0.670
A0A484BYA9	A0A484CBW9	A0A484BYA9	A0A484CBW9	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.575
A0A484BYA9	A0A484CND7	A0A484BYA9	A0A484CND7	2Fe-2S ferredoxin-type domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.928
A0A484BYA9	A0A484DAP3	A0A484BYA9	A0A484DAP3	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.866
A0A484BYA9	A0A484DJR6	A0A484BYA9	A0A484DJR6	2Fe-2S ferredoxin-type domain-containing protein.	PALB2_WD40 domain-containing protein.	0.908
A0A484BYA9	COQ3	A0A484BYA9	A0A484DAY6	2Fe-2S ferredoxin-type domain-containing protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.660
A0A484C1D0	A0A484BXQ3	A0A484C1D0	A0A484BXQ3	ACB domain-containing protein.	Uncharacterized protein.	0.920
A0A484C1D0	A0A484BYA9	A0A484C1D0	A0A484BYA9	ACB domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.670
A0A484C1D0	A0A484CBW9	A0A484C1D0	A0A484CBW9	ACB domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.582
A0A484C1D0	A0A484CND7	A0A484C1D0	A0A484CND7	ACB domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.561
A0A484C1D0	A0A484CYW9	A0A484C1D0	A0A484CYW9	ACB domain-containing protein.	Carrier domain-containing protein.	0.617