Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBY0Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
A0A484CKT4
Uncharacterized protein.
    
0.999
A0A484DMY3
Uncharacterized protein.
    
 0.999
A0A484CH36
MCU domain-containing protein.
    
 0.993
A0A484DPP4
MCU domain-containing protein.
    
 0.993
A0A484CY71
Uncharacterized protein.
   
0.980
A0A484DKI7
Uncharacterized protein.
   
0.980
A0A484CUK1
Prohibitin.
    
 0.921
A0A484C1F6
Uncharacterized protein.
      
 0.868
A0A484DNZ2
AAA domain-containing protein.
     
 0.787
A0A484C073
Uncharacterized protein.
      
 0.769
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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