Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBY1UBA domain-containing protein. (353 aa)    
Predicted Functional Partners:
A0A484CXX8
UBX domain-containing protein.
    
 
 0.988
A0A484DD87
Uncharacterized protein.
    
 
 0.978
A0A484DRZ0
Uncharacterized protein.
    
 
 0.953
A0A484D653
EMC1_C domain-containing protein.
    
 
 0.947
A0A484DER2
Uncharacterized protein.
   
 
 0.926
A0A484D9E4
TPR_REGION domain-containing protein.
    
 
 0.921
A0A484CZU8
Uncharacterized protein.
    
 
 0.902
A0A484D7F1
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.895
A0A484DFK6
Uncharacterized protein.
    
 
 0.880
A0A484C505
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
   0.871
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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