Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CBZ9NUC153 domain-containing protein. (726 aa)    
Predicted Functional Partners:
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 0.999
A0A484C0C1
Uncharacterized protein.
   
 
 0.998
A0A484C8X9
Bms1-type G domain-containing protein.
   
 0.997
A0A484CIG9
WD_REPEATS_REGION domain-containing protein.
   
 0.996
A0A484D586
WD_REPEATS_REGION domain-containing protein.
   
 0.996
A0A484DA66
Brix domain-containing protein.
   
 0.996
A0A484DC75
Nucleolar protein 6.
   
 0.996
A0A484DF24
Uncharacterized protein.
   
 
 0.995
A0A484C6N0
BP28CT domain-containing protein.
   
 0.994
A0A484CEY2
CBF domain-containing protein.
   
 0.994
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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