STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC04N-terminal Ras-GEF domain-containing protein. (70 aa)    
Predicted Functional Partners:
A0A484CN24
Uncharacterized protein.
    
 0.886
A0A484CVY8
Uncharacterized protein.
    
 0.886
A0A484DRB9
Uncharacterized protein.
    
 0.886
A0A484D278
Uncharacterized protein.
    
 0.884
A0A484CL69
Uncharacterized protein.
    
 0.862
A0A484D3S7
Uncharacterized protein.
    
 0.862
A0A484BZS9
Uncharacterized protein.
    
 0.858
A0A484DEG9
Uncharacterized protein.
    
 0.858
A0A484C521
Guanylate kinase-like domain-containing protein.
    
 0.837
A0A484DEV5
PDZ domain-containing protein.
    
 0.832
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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