STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC07VWFA domain-containing protein. (639 aa)    
Predicted Functional Partners:
A0A484DEF1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.988
A0A484CMF2
Uncharacterized protein.
   
 0.974
A0A484CWM6
Uncharacterized protein.
   
 0.974
A0A484C2N0
Uncharacterized protein.
   
 0.949
A0A484C6X0
Uncharacterized protein.
   
 0.949
A0A484DD32
Uncharacterized protein.
   
 0.949
A0A484CA53
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.938
A0A484CT07
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.938
A0A484CFL7
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
   
 0.925
A0A484CZ56
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
   
 0.925
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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