Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC18Uncharacterized protein. (1738 aa)    
Predicted Functional Partners:
A0A484C9E5
Integrin beta.
   
 0.898
A0A484DGC9
Uncharacterized protein.
   
 0.759
A0A484DN86
Integrin beta; Belongs to the integrin beta chain family.
    
 0.600
A0A484CRI0
Uncharacterized protein.
   
  0.537
A0A484CQX0
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.520
A0A484C2W1
Uncharacterized protein.
    
  0.510
A0A484CM82
Uncharacterized protein.
    
  0.510
A0A484CQ17
Uncharacterized protein.
    
  0.510
A0A484DNF1
Protein disulfide-isomerase.
    
  0.503
A0A484DNQ0
Protein disulfide-isomerase.
    
  0.503
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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