Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC23Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
A0A484CDJ5
OBG-type G domain-containing protein.
   
 0.999
A0A484CFV0
OBG-type G domain-containing protein.
   
 0.967
A0A484BZV5
Uncharacterized protein.
   
 
 0.966
A0A484CWL6
WD_REPEATS_REGION domain-containing protein.
    
 
 0.851
A0A484D9S9
RWD domain-containing protein.
   
 
 0.849
A0A484DRL3
Ubiquitin carboxyl-terminal hydrolase.
   
   0.843
A0A484DFZ5
Uncharacterized protein.
   
   0.828
A0A484CTW4
Uncharacterized protein.
   
 
 0.823
A0A484CM67
Uncharacterized protein.
   
 
 0.817
A0A484D7V8
Uncharacterized protein.
   
   0.817
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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