Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC34Uncharacterized protein. (1173 aa)    
Predicted Functional Partners:
A0A484CQL1
Tyrosine--tRNA ligase.
  
 
 0.686
A0A484D9L1
RRM domain-containing protein.
      
 0.659
A0A484C423
Uncharacterized protein.
  
  
 0.639
A0A484CDU3
Serine/threonine-protein phosphatase.
   
   0.604
A0A484DB41
Serine/threonine-protein phosphatase.
   
   0.604
A0A484C4J7
Thymidylate_kin domain-containing protein.
     
 0.543
A0A484DAL4
GST C-terminal domain-containing protein.
   
 
 0.527
A0A484CA73
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.520
A0A484D424
Tyrosine--tRNA ligase.
     
 0.509
A0A484DGD4
Uncharacterized protein.
  
     0.493
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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