STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC34Uncharacterized protein. (1173 aa)    
Predicted Functional Partners:
A0A484CQL1
Tyrosine--tRNA ligase.
  
  
 0.663
A0A484DRR5
HD domain-containing protein.
  
    0.525
A0A484DGD4
Uncharacterized protein.
  
     0.493
A0A484D424
Tyrosine--tRNA ligase.
     
 0.442
A0A484D9L1
RRM domain-containing protein.
      
 0.441
A0A484BZ96
Uncharacterized protein.
   
    0.428
A0A484DMF0
Uncharacterized protein.
  
 
 0.417
A0A484DET8
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.416
A0A484C423
Uncharacterized protein.
  
  
 0.403
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.