STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC38Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
A0A484C9H6
BBS1 domain-containing protein.
    
 
 0.622
A0A484DN16
TPR_REGION domain-containing protein.
    
 
 0.621
A0A484CWM5
Uncharacterized protein.
    
 
 0.572
A0A484C470
TPR_REGION domain-containing protein.
    
 
 0.566
A0A484D1S8
Bardet-Biedl syndrome 2 protein homolog.
    
 
 0.504
A0A484D2Z2
Uncharacterized protein.
    
 
 0.494
A0A484CX64
Uncharacterized protein.
      
 0.437
A0A484CND5
Uncharacterized protein.
      
 0.428
A0A484CD04
Uncharacterized protein.
      
 0.426
A0A484C4N0
Uncharacterized protein.
      
 0.403
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.