STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC55Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
A0A484CGN1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.957
A7UIU8_PERFV
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.853
A0A484CS02
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.833
A0A484DCJ6
Uncharacterized protein.
  
 0.832
A0A484CKH1
Ribosomal_L7Ae domain-containing protein.
   
 0.831
A0A484CV56
TRASH domain-containing protein.
  
 0.831
A0A484D6V3
Uncharacterized protein.
  
 0.831
A0A484DF74
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.831
A0A484DKJ1
Uncharacterized protein.
   
 0.830
A0A484CWW8
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.828
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.