Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC66Galectin. (179 aa)    
Predicted Functional Partners:
A0A484DAD6
Uncharacterized protein.
      
 0.682
A0A484CAM1
Rap-GAP domain-containing protein.
      
 0.657
A0A484C5A5
PID domain-containing protein.
      
 0.636
A0A484DAB7
Magnesium transporter.
      
 0.636
A0A484CN09
Uncharacterized protein.
      
 0.621
A0A484DEU3
Uncharacterized protein.
      
 0.621
A0A484CFV4
Galectin.
  
   
 0.545
A0A484CFM4
Galectin.
      
 0.518
A0A484DA87
Uncharacterized protein.
    
 
 0.513
A0A484CRT5
Uncharacterized protein.
      
 0.477
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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