STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CC84Uncharacterized protein. (383 aa)    
Predicted Functional Partners:
A0A484CJS6
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.767
A0A484C483
WD_REPEATS_REGION domain-containing protein.
   
    0.756
A0A484C7X0
Brix domain-containing protein.
   
    0.698
A0A484DF84
Sas10 domain-containing protein.
   
    0.698
A0A484CBZ9
NUC153 domain-containing protein.
   
  
 0.660
A0A484DDS5
RRM domain-containing protein.
    
   0.621
A0A484DB22
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
    0.588
A0A484DQ63
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
    0.588
A0A484CEY2
CBF domain-containing protein.
   
    0.563
A0A484DDC6
Uncharacterized protein.
   
 
  0.538
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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