STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCA8Calponin-homology (CH) domain-containing protein. (2025 aa)    
Predicted Functional Partners:
A0A484BYX7
Uncharacterized protein.
    
  0.505
A0A484D675
Uncharacterized protein.
    
  0.505
A0A484D6N9
Uncharacterized protein.
    
  0.505
A0A484BZ99
Uncharacterized protein.
    
 
 0.493
A0A484CP92
Uncharacterized protein.
    
 
 0.493
A0A484D324
Uncharacterized protein.
    
 
 0.493
A0A484D3G1
Uncharacterized protein.
    
 
 0.493
A0A484D5Q7
Uncharacterized protein.
    
 
 0.493
A0A484DEV6
Uncharacterized protein.
    
 
 0.493
A0A484DFK8
Uncharacterized protein.
    
 
 0.493
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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