STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCC3Aspartate aminotransferase. (410 aa)    
Predicted Functional Partners:
A0A484DA58
Malate dehydrogenase.
   
 0.993
A0A484CCE5
Malate dehydrogenase.
   
 0.981
A0A484DK89
Malate dehydrogenase.
   
 0.981
A0A484DPZ2
Aspartate aminotransferase.
  
 
0.980
A0A484C0R0
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.975
A0A484CL66
Glutamine amidotransferase type-2 domain-containing protein.
   
 0.975
A0A484D219
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.975
A0A484D2B8
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.975
A0A484CZQ5
Uncharacterized protein.
   
 0.973
A0A484C8A5
Aminotran_1_2 domain-containing protein.
  
 0.972
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.