STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCE6Uncharacterized protein. (519 aa)    
Predicted Functional Partners:
A0A484DHM2
Plug_translocon domain-containing protein.
   
 0.957
A0A484DJ89
Plug_translocon domain-containing protein.
   
 0.957
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
 0.939
A0A484C333
RF_PROK_I domain-containing protein.
  
 
 0.923
A0A484D7R4
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.920
A0A484DHU4
SRP54 domain-containing protein.
  
 
 0.917
A0A484CGQ9
Uncharacterized protein.
   
 
 0.909
A0A484DA17
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.908
A0A484CBU1
Uncharacterized protein.
     
 0.894
A0A484CBF8
Uncharacterized protein.
  
   0.889
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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