A0A484CCE9 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C7N5	A0A484CCE9	Uncharacterized protein.	S1 motif domain-containing protein.	0.895
A0A484C7N5	A0A484CQ56	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A484C7N5	A0A484CRE9	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.983
A0A484C7N5	A0A484CXB2	Uncharacterized protein.	S1 domain-containing protein.	0.963
A0A484C7N5	A0A484CXH3	Uncharacterized protein.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.999
A0A484C7N5	A0A484D0Q1	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A484C7N5	A0A484DIX0	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A484C7N5	A0A484DJ24	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.952
A0A484C7N5	A0A484DJ77	Uncharacterized protein.	RPOL4c domain-containing protein.	0.966
A0A484CCE9	A0A484C7N5	S1 motif domain-containing protein.	Uncharacterized protein.	0.895
A0A484CCE9	A0A484CQ56	S1 motif domain-containing protein.	Uncharacterized protein.	0.797
A0A484CCE9	A0A484CRE9	S1 motif domain-containing protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.826
A0A484CCE9	A0A484CXB2	S1 motif domain-containing protein.	S1 domain-containing protein.	0.776
A0A484CCE9	A0A484CXH3	S1 motif domain-containing protein.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.885
A0A484CCE9	A0A484D0Q1	S1 motif domain-containing protein.	Uncharacterized protein.	0.793
A0A484CCE9	A0A484DDK6	S1 motif domain-containing protein.	Uncharacterized protein.	0.775
A0A484CCE9	A0A484DIX0	S1 motif domain-containing protein.	Uncharacterized protein.	0.806
A0A484CCE9	A0A484DJ24	S1 motif domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.806
A0A484CCE9	A0A484DJ77	S1 motif domain-containing protein.	RPOL4c domain-containing protein.	0.781
A0A484CQ56	A0A484C7N5	Uncharacterized protein.	Uncharacterized protein.	0.986