Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCG0RING-type domain-containing protein. (382 aa)    
Predicted Functional Partners:
A0A484CG97
Uncharacterized protein.
      
 0.661
A0A484D2Z5
Uncharacterized protein.
      
 0.650
A0A484CV74
Uncharacterized protein.
      
 0.644
A0A484DMX5
GATA-type domain-containing protein.
      
 0.639
A0A484DBX5
RING-type domain-containing protein.
      
 0.627
dis3l2
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily.
   
  
 0.625
A0A484D5U0
TPR_REGION domain-containing protein.
      
 0.624
A0A484CPT6
Uncharacterized protein.
      
 0.546
A0A484CTI5
RING-type domain-containing protein.
      
 0.546
A0A484CZ96
RING-type domain-containing protein.
      
 0.546
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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