STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCJ5Helicase ATP-binding domain-containing protein. (737 aa)    
Predicted Functional Partners:
A0A484DF84
Sas10 domain-containing protein.
   
 0.975
A0A484DB68
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
   
 0.957
A0A484D1Z5
WD_REPEATS_REGION domain-containing protein.
   
 0.937
A0A484CWR8
Uncharacterized protein.
   
  0.934
A0A484DF24
Uncharacterized protein.
   
 
 0.931
A0A484DN65
Uncharacterized protein.
  
 0.931
A0A484C6F2
Sm domain-containing protein.
   
 0.930
A0A484DC75
Nucleolar protein 6.
   
 0.930
A0A484BY27
Nop domain-containing protein.
   
 
 0.929
A0A484C8X9
Bms1-type G domain-containing protein.
   
 
 0.927
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.