Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCJ8Uncharacterized protein. (562 aa)    
Predicted Functional Partners:
A0A484CBU9
Mis18 domain-containing protein.
    
   0.782
A0A484CK04
Uncharacterized protein.
    
   0.782
A0A484DPC2
Adrift-type SAM-dependent 2'-O-MTase domain-containing protein.
      
 0.628
A0A484CBR7
ARL2_Bind_BART domain-containing protein.
      
 0.618
A0A484CCI1
PINc domain-containing protein.
      
 0.606
A0A484C9T9
Uncharacterized protein.
      
 0.602
A0A484DCB1
Uncharacterized protein.
      
 0.567
A0A484C7M0
ANK_REP_REGION domain-containing protein.
    
   0.555
A0A484CHK4
ANK_REP_REGION domain-containing protein.
    
   0.555
A0A484CM17
ANK_REP_REGION domain-containing protein.
    
   0.555
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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