Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCK5DDE_Tnp_1_7 domain-containing protein. (537 aa)    
Predicted Functional Partners:
A0A484DK90
Uncharacterized protein.
   
 0.856
A0A484CU25
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
   0.825
A0A484DB76
Integrase catalytic domain-containing protein.
   
 
 0.769
A0A484DI78
Uncharacterized protein.
    
 
 0.759
A0A484D5Y1
Uncharacterized protein.
    
 
 0.721
A0A484CBS0
Uncharacterized protein.
    
 
 0.708
A0A484D844
GpcrRhopsn4 domain-containing protein.
   
  
 0.705
A0A484C8Q0
RRM domain-containing protein.
    
 
 0.700
A0A484BYP0
DDE Tnp4 domain-containing protein.
      
 0.689
A0A484CV47
Uncharacterized protein.
    
 
 0.670
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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