Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCK7Uncharacterized protein. (761 aa)    
Predicted Functional Partners:
A0A484BYG7
Uncharacterized protein.
  
 
0.994
A0A484D0Y2
ILEI domain-containing protein.
     
 0.988
A0A484DAT2
Fibronectin type-III domain-containing protein.
     
 0.988
A0A484D532
Peptidase S72 domain-containing protein.
    
 0.956
A0A484DE52
Peptidase S72 domain-containing protein.
    
 0.956
A0A484DFW5
MIR domain-containing protein.
    
 0.943
A0A484CDR1
Uncharacterized protein.
    
 
 0.923
A0A484CFA5
Uncharacterized protein.
   
  
 0.898
A0A484DGA6
NTP_transferase domain-containing protein.
  
 
 0.895
A0A484CCL1
Protein kinase domain-containing protein.
      
 0.882
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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