STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCK9Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
A0A484C7C8
t-SNARE coiled-coil homology domain-containing protein.
    
 0.966
A0A484CXK7
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.964
A0A484DII4
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.963
A0A484CA73
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.957
A0A484DC29
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.953
A0A484C1N7
Uncharacterized protein.
   
 0.941
A0A484C6H3
t-SNARE coiled-coil homology domain-containing protein.
    
 0.941
A0A484CHX5
Uncharacterized protein.
   
 0.941
A0A484DAL7
V-SNARE coiled-coil homology domain-containing protein.
    
 0.930
A0A484BXZ5
t-SNARE coiled-coil homology domain-containing protein.
    
 0.921
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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